logo

Blackbird(2019)2 Meglг©vе‘: Feliratok

Software for motif discovery and next generation sequencing analysis



HOMER (Hypergeometric Optimization of Motif EnRichment) is a suite of tools for Motif Discovery and ChIP-Seq analysis. It is a collection of command line programs for unix-style operating systems written in mostly perl and c++. Homer was primarily written as a de novo motif discovery algorithm that is well suited for finding 8-12 bp motifs in large scale genomics data.

Hardware Requirements (recommended): 2+ Gb memory (4-8+ Gb), 10+ Gb Hard Drive space (50+ Gb)
Software Requirements: Unix compatible OS (or cygwin), perl, gcc, make, wget (optional for full functionality: R, DESeq2, blat, bedGraphToBigWig, liftOver)
License: GPLv3

HOMER works on pretty much any Linux/UNIX systems, including MacOS (if Xcode compilers are installed) and on Windows using either cygwin or a Linux subsystem.

If you are looking specifically for HOMER2, you are in the right place! HOMER2 is integrated into HOMER.

Full Program Download

(2019), directed by Roger Michell , is a drama that explores the profound emotional landscape of a family coming to terms with a planned farewell. It is an American remake of the 2014 Danish film Silent Heart ( Stille hjerte ), both written by Christian Torpe . Plot and Core Themes

The story follows (Susan Sarandon), a matriarch suffering from ALS (Lou Gehrig's disease), which is slowly robbing her of her motor functions. She gathers her three-generation family at her remote seaside home for one final weekend together before she ends her life on her own terms.

Program Components and Older Versions

Blackbird(2019)2 Meglг©vе‘: Feliratok

(2019), directed by Roger Michell , is a drama that explores the profound emotional landscape of a family coming to terms with a planned farewell. It is an American remake of the 2014 Danish film Silent Heart ( Stille hjerte ), both written by Christian Torpe . Plot and Core Themes

The story follows (Susan Sarandon), a matriarch suffering from ALS (Lou Gehrig's disease), which is slowly robbing her of her motor functions. She gathers her three-generation family at her remote seaside home for one final weekend together before she ends her life on her own terms. Blackbird(2019)2 MeglГ©vЕ‘ feliratok


Update Information

Change Log - Short description of recent changes

update.txt - Current HOMER configuration list (Currently support human hg17/hg18/hg19, mouse mm8/mm9, rat rn4, X. tropicalis xenTro2, drosophila dm3, and C. elegans ce6, Zebrafish danRer7, yeast sacCer2, Arabidopsis tair10, Rice msu6, Pombe ASM294v1)


Blackbird(2019)2 MeglГ©vЕ‘ feliratok
Can't figure something out? Questions, comments, concerns, or other feedback:
cbenner@ucsd.edu